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Association analysis of mitochondrial DNA heteroplasmic variants: Methods and application

Submitting Author
Liu, Chunyu
Submitting Author's Email
Authors
Xianbang Sun1, Katia Bulekova2, Meng Lai1, Achilleas Pitsillides1, Xue Liu1, Yuankai Zhang1, Thomas Blackwell3, Xiuqing Guo4, Qian Yong5, Laura M. Raffield6, Jerome I. Rotter4, Stephen S. Rich7, Goncalo Abecasis3, April P. Carson8, Ramachandran S. Vasan9,10, Joshua C. Bis11, Bruce M. Psaty11,12, Eric Boerwinkle13,14, Annette L. Fitzpatrick15, Claudia L. Satizabal,10,17 Dan E. Arking19, Jun Ding5, Daniel Levy10,20, TOPMed mtDNA working group, Chunyu Liu1,10
Journal name for most current submission
Mitochondrion
Associated TOPMed paper proposal
This manuscript has been approved by the original paper proposal's Working Group(s) or is "single PI"
This manuscript has been approved by the original paper proposal's Working Group(s) or is "single PI"
Acknowledgments
I have followed instructions for TOPMed Acknowledgments
I've received approval for all data sets used in this manuscript, including adding new data sets and canceling all unused ones.
I've received approval for all data sets used in this manuscript, including adding new data sets and canceling all unused ones.
I have followed the Data Use Limitations for each of the data sets used in this manuscript, if applicable.
Yes
I've included at least 1 co-author from each study used in analysis or the PI declined an offer to have their study represented.
Yes
I certify that all co-authors have reviewed and approved the manuscript for submission.
Yes
Upload all necessary study-specific approval documentation.
I've included at least 1 DCC/ACC author, or they declined authorship or deemed acknowledgement sufficient.
I've included at least 1 DCC/ACC author, or they declined authorship or deemed acknowledgement sufficient.
I’ve included at least 1 IRC author, or they declined authorship or deemed acknowledgement sufficient.
I’ve included at least 1 IRC author, or they declined authorship or deemed acknowledgement sufficient.
I've included at least 1 author from relevant omics center(s) or they declined authorship or deemed acknowledgement sufficient.
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TOPMed data used in this manuscript

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Parent Study: Consent Group Review Status
ARIC:DS-CVD-IRB Approved automatically after 2 weeks
ARIC:HMB-IRB Approved automatically after 2 weeks
CARDIA:HMB-IRB Request cancelled by original requester
CARDIA:HMB-IRB-NPU Request cancelled by original requester
CHS:DS-CVD-MDS Approved
CHS:DS-CVD-NPU-MDS Approved
CHS:HMB-MDS Approved
CHS:HMB-NPU-MDS Approved
FHS:HMB-IRB-MDS Approved
FHS:HMB-IRB-NPU-MDS Approved
JHS:DS-FDO-IRB Approved
JHS:DS-FDO-IRB-NPU Approved
JHS:HMB-IRB Approved
JHS:HMB-IRB-NPU Approved
MESA:HMB Approved
MESA:HMB-NPU Approved automatically after 2 weeks
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