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Whole genome sequence analysis of platelet traits in the NHLBI Trans-Omics for Precision Medicine Initiative

Manuscript ID: 12285

Submitting Author
Raffield, Laura
Submitting Author's Email
Authors
Amarise Little1, Yao Hu2, Quan Sun3, Deepti Jain1, Jai Broome1, Ming-Huei Chen4,5, Florian Thibord6, Caitlin McHugh1, Praveen Surendran7,8,9,10, Thomas W Blackwell11, Jennifer A. Brody12, Arunoday Bhan13, Nathalie Chami14, Paul S de Vries15, Lynette Ekunwe16, Nancy Heard-Costa17,5, Brian D Hobbs18, Ani Manichaikul19, Jee-Young Moon20, Michael H. Preuss14, Kathleen Ryan21, Zhe Wang14, Marsha Wheeler22, Lisa R. Yanek23, Goncalo R Abecasis24, Laura Almasy25, Terri H Beaty26, Lewis C. Becker27, John Blangero28, Eric Boerwinkle15, Adam S. Butterworth7,8,29,30,31, Hélène Choquet32, Adolfo Correa16, Joanne E Curran28, Nauder Faraday33, Myriam Fornage34, David C Glahn35, Lifang Hou36, Eric Jorgenson32, Charles Kooperberg37, Joshua P. Lewis21, Donald M Lloyd-Jones36, Ruth J.F. Loos14, Nancy Min16, Braxton D. Mitchell21, Alanna C Morrison15, Debbie Nickerson22, Kari E North38, Jeffrey R. O'Connell21, Nathan Pankratz39, Bruce M. Psaty40,41,42, Vasan Ramachandran43,44,5, Stephen S. Rich45, Jerome I. Rotter46, Albert V Smith11, Nicholas L. Smith41,42,47, Hua Tang48, Russell P. Tracy49, Matthew P. Conomos1, Cecelia A. Laurie1, Rasika A. Mathias50, Yun Li51, Paul L. Auer52, NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium, Timothy Thornton1*, Alexander P Reiner53*, Andrew D. Johnson6,5*, Laura M Raffield54*
Journal name for most current submission
Human Molecular Genetics
Associated TOPMed paper proposal
This manuscript has been approved by the original paper proposal's Working Group(s) or is "single PI" *
This manuscript has been approved by the original paper proposal's Working Group(s) or is "single PI"
Acknowledgments
I have followed instructions for TOPMed Acknowledgments
I've received approval for all data sets used in this manuscript, including adding new data sets and canceling all unused ones. *
I've received approval for all data sets used in this manuscript, including adding new data sets and canceling all unused ones.
I have followed the Data Use Limitations for each of the data sets used in this manuscript, if applicable. *
Yes
I've included at least 1 co-author from each study used in analysis or the PI declined an offer to have their study represented. *
Yes
I certify that all co-authors have reviewed and approved the manuscript for submission. *
Yes
I've included at least 1 DCC/ACC author, or they declined authorship or deemed acknowledgement sufficient.
I've included at least 1 DCC/ACC author, or they declined authorship or deemed acknowledgement sufficient.
I’ve included at least 1 IRC author, or they declined authorship or deemed acknowledgement sufficient.
I’ve included at least 1 IRC author, or they declined authorship or deemed acknowledgement sufficient.
I've included at least 1 author from relevant omics center(s) or they declined authorship or deemed acknowledgement sufficient.
I've included at least 1 author from relevant omics center(s) or they declined authorship or deemed acknowledgement sufficient.

TOPMed data used in this manuscript

The data set approvals listed here should match the TOPMed data used in this manuscript.

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Please "cancel" any data set requests that were not used in this manuscript. Note: only the paper proposal submitter or their designated updater can cancel data sets.

Parent Study: Consent Group Review Status Actions
ARIC:DS-CVD-IRB Approved automatically after 2 weeks
ARIC:HMB-IRB Approved automatically after 2 weeks
Amish:HMB-IRB-MDS Approved
BioMe:GRU Request cancelled by original requester
BioMe:HMB-NPU Approved
CARDIA:HMB-IRB Approved automatically after 2 weeks
CARDIA:HMB-IRB-NPU Approved automatically after 2 weeks
CHS:DS-CVD-MDS Approved
CHS:DS-CVD-NPU-MDS Approved
CHS:HMB-MDS Approved
CHS:HMB-NPU-MDS Approved
COPDGene:DS-CS-RD Request cancelled by original requester
COPDGene:HMB Approved
EOCOPD:DS-CS-RD Request cancelled by original requester
FHS:HMB-IRB-MDS Approved automatically after 2 weeks
FHS:HMB-IRB-NPU-MDS Approved
GeneSTAR:DS-CVD-IRB-NPU-MDS Approved
HCHS_SOL:HMB Approved automatically after 2 weeks
HCHS_SOL:HMB-NPU Approved automatically after 2 weeks
JHS:DS-FDO-IRB Approved
JHS:DS-FDO-IRB-NPU Approved
JHS:HMB-IRB Approved
JHS:HMB-IRB-NPU Approved
MESA:HMB Approved
MESA:HMB-NPU Approved
MLOF:HMB-PUB Request cancelled by original requester
Mayo_VTE:GRU Request cancelled by original requester
PUSH_SCD:DS-SCD-IRB-PUB-COL Request cancelled by original requester
PharmHU:DS-SCD-RD Request cancelled by original requester
PharmHU:HMB Request cancelled by original requester
REDS-III_Brazil:GRU-IRB-PUB-COL-NPU Request cancelled by original requester
SAFS:DS-DHD-IRB-PUB-MDS-RD Approved
WHI:HMB-IRB Approved
WHI:HMB-IRB-NPU Approved
walk_PHaSST:DS-SCD-IRB-PUB-COL-NPU-MDS-RD Request cancelled by original requester
walk_PHaSST:HMB-IRB-PUB-COL-NPU-MDS-GSO Request cancelled by original requester
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