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Improving imputation quality in Samoans through the integration of population-specific sequences into existing reference panels

Submitting Author
Carlson, Jenna
Submitting Author's Email
Authors
Jenna C. Carlson, Mohanraj Krishnan, Shuwei Liu, Kevin J. Anderson, Jerry Z. Zhang, Toni-Ann J. Yapp, Hong Cheng, Take Naseri, Muagututi‘a Sefuiva Reupena, Satupa‘itea Viali, Ranjan Deka, Nicola L. Hawley, Stephen T. McGarvey, Daniel E. Weeks, Ryan L. Minster
Journal name for most current submission
American Journal of Human Genetics
Associated TOPMed paper proposal
This manuscript has been approved by the original paper proposal's Working Group(s) or is "single PI"
This manuscript has been approved by the original paper proposal's Working Group(s) or is "single PI"
Acknowledgments
I have followed instructions for TOPMed Acknowledgments
I've received approval for all data sets used in this manuscript, including adding new data sets and canceling all unused ones.
I've received approval for all data sets used in this manuscript, including adding new data sets and canceling all unused ones.
I have followed the Data Use Limitations for each of the data sets used in this manuscript, if applicable.
Yes
I've included at least 1 co-author from each study used in analysis or the PI declined an offer to have their study represented.
Yes
I certify that all co-authors have reviewed and approved the manuscript for submission.
Yes
I've included at least 1 DCC/ACC author, or they declined authorship or deemed acknowledgement sufficient.
I've included at least 1 DCC/ACC author, or they declined authorship or deemed acknowledgement sufficient.
I’ve included at least 1 IRC author, or they declined authorship or deemed acknowledgement sufficient.
I’ve included at least 1 IRC author, or they declined authorship or deemed acknowledgement sufficient.
I've included at least 1 author from relevant omics center(s) or they declined authorship or deemed acknowledgement sufficient.
I've included at least 1 author from relevant omics center(s) or they declined authorship or deemed acknowledgement sufficient.

TOPMed data used in this manuscript

The data set approvals listed here should match the TOPMed data used in this manuscript.

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Parent Study: Consent Group Review Status
Samoan:GRU-IRB-PUB-COL-NPU-GSO Approved
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